Lucidcentral Identification and Diagnostic Tools
Lucid May 2022 Newsletter

Introduction

 

Last year we released a major Lucid v4 update that allows authors to build new dichotomous keys or to import existing paper-based keys and transform them to online, interactive keys. 

 

A recent example of such a conversion concerns a series of keys to insects and spiders that can be found in rice in West Africa.

 

The original book in which these keys were published - E A Heinrichs and Alberto T Barrion (2004) Rice-feeding insects and selected natural enemies in West Africa: Biology, ecology, identification, has been out of print for a number of years. 

 

Fortunately a digital copy was published online by the University of Nebraska – Lincoln, providing the digital text and figures for the conversion of these keys to  Lucid, and are now hosted on Lucidcentral. 

 

A similar key to rice pests found in S.E. Asia is to be published shortly. This will be one of the largest dichotomous keys we’ve come across: 852 couplets and 1740 leads, covering 862 taxa!

 

It’s also pleasing to see how many new and diverse keys have just been released. This includes commercial timber identification, sawflies, tropical ferns and lycophytes, Calanoid Copepods, trees of the Diamantina located in Serra do Espinhaço, Brazil, a place recognized by UNESCO as a Biosphere Reserve, and finally, a key used by police forensic units for the identification of third instar larvae of 12 species of Calliphoridae.

 

We hope you enjoy reading our latest newsletter.

 

Regards,

 

The Lucid Team

Spotlight on Lucid keys supporting plant taxonomy at Missouri Botanical Garden

While most Lucid identification keys aim to provide public access to taxonomic and diagnostic expertise (via online and mobile apps), there are situations where Lucid keys can be used to support the taxonomic process itself. This spotlight article illustrates how Lucid is being used by Dr Tom Croat at the Missouri Botanical Garden, St Louis, USA to support the taxonomic work of his team, as well as providing an online identification aid. 

Tom Croat with 100,000th collection Anthurium centimillissimum photo by Dan Levin 

Tom Croat with the 100,000th collection Anthurium centimillissimum photo by Dan Levin.

For many years, Tom’s taxonomic work has focussed on the philodendron or aroid family (Araceae). The genera of this family are often large and morphologically challenging, particularly the genus Anthurium, possibly the world’s largest genus with over 3,000 species. As Tom puts it - “Araceae is a family with still thousands of undescribed species: the only way one can deal with such large groups is to use Lucid. Without Lucid, I could not deal with it, since there are now 1650 species in Lucid keys for Anthurium. We also have Lucid Keys for Adelonema, Dieffenbachia, Dracontium, Philodendron and Stenospermation. Current work is on constructing a key for Spathiphyllum”. 

Over the years, Tom has collected more than 109,000 herbarium collections, more than 10,000 living plants, and maintains the world's largest and most comprehensive collection of living aroid plants in the Garden's greenhouses.

Lucid matrix keys are initially used as a means of “cataloguing” new species that are introduced to the collection. The major taxonomic features of the living plants, as well as of dried herbarium specimens, are described in detail. The characters (more than 100 in all) are recorded into the existing Lucid Matrix, and new feature/states are added as necessary, together with their respective scores.   

With the recent availability of the new dichotomous (pathway) key construction option, that has recently been upgraded and incorporated in the Lucid Builder software, Tom thinks there may be new opportunities here. “Having a Lucid dichotomous key would allow us to prepare keys to separate species in many groups that remain poorly known. While the Lucid matrix key enables us to select species that have already been incorporated into the key, a dichotomous key allows one to decide where a given species needs to be placed that is not already in the key. 

Moreover, published revisions are expected to have dichotomous keys that are an integral part of the revision, so a Lucid Key, workable as it might be, will not serve that purpose. Thus, it is important that the Lucid Program should provide a means whereby a dichotomous key can be constructed from the existing taxonomic data stored within it. There are a number of large genera in Araceae, where we have 250 or more species. A dichotomous key allows one to visualize where new elements should fit and then one can decide if it should be fully described and entered into the Lucid matrix key”. 

Tom has been in touch with us regarding further ideas he has on how both Lucid matrix and dichotomous keys might be adapted to help in this taxonomic process, which we are looking into. For further information about Tom’s work go to a recent publication - Araceae, a Family with Great Potential February 2019 Annals of the Missouri Botanical Garden 104(1):3-9 

 

Latest keys

SawFly GenUS

Sawfly GenUS

This latest release from the Identification Technology Program (ITP) within the Animal and Plant Health Inspection Service (APHIS) includes a wealth of information about sawflies, keys to sawfly genera of North America, as well as keys to Sirex species of the World.

https://idtools.org/id/sawfly/

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BRAZILIAN COMMERCIAL TIMBERS – Interactive wood identification key

Brazilian Commercial Timbers – Interactive wood identification key

This is an interactive key created to identify timbers commonly traded in Brazil. The identification is based on general characters and macroscopic anatomical features of wood.

https://keys.lucidcentral.org/search/madeiras-comerciais-do-brasil/

This key is available in English and Portuguese.

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Australian Tropical Ferns and Lycophytes

Australian Tropical Ferns and Lycophytes

Australian Tropical Ferns and Lycophytes is a fern and lycophyte identification and information system for species occurring in northern Australia.

https://keys.lucidcentral.org/search/australian-tropical-ferns-and-lycophytes/

Also available as an Android or iOS app.

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Digital Keys to the Calanoid Copepods

Keys to the Calanoid Copepods

These keys are looking to facilitate the identification of calanoid copepods (adult specimens (males and/or females)) to the level of family in the first instance and to the level of genera for the group of copepods known as the ‘Bradfordians’ and the families Centropagidae, Calanidae and Megacalanidae. Developed by scientists in the National Institute of Water and Atmospheric Research, New Zealand and CSIRO, Australia.

https://keys.lucidcentral.org/search/calanoid-copepods/

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Tubulifera Australiensis

Tubulifera Australiensis

In the insect Order Thysanoptera, the suborder Tubulifera includes only a single family of living thrips, the Phlaeothripidae, and this family includes at least 66% of the thrips species known from Australia. This illustrated Lucid identification system helps to distinguish the 150 genera of Phlaeothripidae recorded from Australia.

https://keys.lucidcentral.org/search/tubulifera-australiensis/

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Diamantina trees

Diamantina trees

Interactive identification key to trees that occur in and around Diamantina. Diamantina is located in Serra do Espinhaço, Brazil, a place recognized by UNESCO as one of the Biosphere Reserves.

https://keys.lucidcentral.org/search/diamantina-trees/

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A tool for identifying insects and spiders in West African Rice

A tool for identifying insects and spiders in West African Rice

Keys to insects found in rice in 17 West African countries provides online help to identify specimens in rice insect collections and collected from the field. These are the first comprehensive taxonomic keys to West African rice arthropods and provide illustrations for 275 species of insects and 69 species of spiders associated with rice agroecosystems

https://keys.lucidcentral.org/keys/v4/west_african_rice_insects_and_spiders/

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nteractive identification key for third instar larvae of Calliphoridae (Insecta, Diptera) of Neotropical forensic importance

Interactive identification key for third instar larvae of Calliphoridae (Insecta, Diptera) of Neotropical forensic importance

This key was developed to allow the identification of third instar larvae of 12 species of Calliphoridae (Insecta, Diptera, Oestroidea) of forensic importance that can be found in Brazil and in the Neotropical region. It was developed with the aim of helping police experts, students, and various professionals with, who may have limited familiarity with taxonomy, to obtain a safe and reliable diagnosis.

https://keys.lucidcentral.org/search/chave-larva-calliphoridae/

This key is available in English and Portuguese.

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Software Updates

Lucid v4

Lucid v4 

A new update of Lucid v4 (4.0.25 20220503) has been released and is available to download via Lucidcentral.org. See the release notes for bug fixes and changes.

https://apps.lucidcentral.org/lucid4/updates.html

 

Download (login required) via:

https://www.lucidcentral.org/my-account/downloads/

 

Fact Sheet Fusion logoA new update of Fact Sheet Fusion will be released at the end of May.

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